Scripts & Programs

On this you will find code used in my published papers.

SSM_package.zip

A supplement to:

Breed, G. A., I. D. Jonsen, R. A. Myers, W. D. Bowen, and M. L. Leonard. 2009. Sex-specific, seasonal foraging tactics of adult grey seals (Halichoerus grypus) revealed by state-space analysis. Ecology 90:3209-3221 [pdf].

This .zip archive includes all the scripts and instructions for fitting the state-space models used in the analysis of Breed et al. (2009), and the models are very similar to those used in Jonsen et al. 2005. The instructions are for a Windows based machine, but installation is essentially the same for Linux with WINE running. Though I have done my best to make these scripts easy to use and install, they are released here with no support or warranty, and I cannot guarantee a response to requests for technical help.