Programs for the analysis of animal social structure (SOCPROG)

Written by Hal Whitehead

NEW

 SOCPROG2.4 for MATLAB 7.7 is now (June 2009) available for downloading, together with a compiled version (which does not require you to have a copy of MATLAB). This version includes new file input options, especially for dyadic interaction data, the ability to define interaction rates flexibly, and analyses of behavioural asymmetry and dominance hierarchies.

 

SOCPROG is a series of MATLAB programs written by Hal Whitehead for analyzing data on the social structure, population structure and movements of identified individuals. The programs are designed to be easy to use, most input is done through graphical user interfaces (i.e. windows with things to click on), and most things can be done without any knowledge of MATLAB (although this helps for custom options, figuring out errors, making your own extensions, etc.). The programs are also designed to be pretty flexible so you can tailor the analyses to your data and hypotheses.

These programs are available to anyone who would like to use them. This page contains a brief introduction to the main features of the programs. It also contains instructions regarding the downloading of the programs. Please take the time to read through this introductory page before downloading the programs. At the bottom of this page you are given the option of viewing the complete manual associated with these programs or proceeding to download the programs.

Among the things the programs do are:

Unless you use the compiled version, You will have to buy or borrow a copy of MATLAB plus the Statistics Toolbox (see http://www.mathworks.com/ for purchasing information and more about MATLAB).

There are undoubtedly bugs in the programs. I will try to advise you if you run into problems (please email at: hwhitehe@dal.ca) but cannot guarantee I will be available or able to help. Read the manual very carefully. Check results wherever possible.

When you download the uncompiled programs, you will receive a zipped folder. You must extract this first before you can use the programs. This will generate the following files for you:

For information on the compiled version, see SOCPROG_compile.htm

A number of researchers have tried the earlier versions of SOCPROG.The most common problems seem to have been:

a) not having the MATLAB Statistics Toolbox installed or available;

b) MATLAB is case-sensitive, so it is important to type in names of variables, etc., with the same combination of capital and non-capital letters in all parts of the analysis.

Updated by Hal Whitehead, June 2009


If you would like more information, you may view a copy of the complete manual before downloading the programs. Otherwise, you may proceed with downloading.


[View Complete Manual First]

[Proceed with Downloading]

Please report any problems with this site to:
Hal Whitehead at hwhitehe@dal.ca



If you would like to know more about other types of research we do, come take a look at the Whitehead Lab Home Page.