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IN PRESS
2012
Roy D, T
Hurlbut, DE Ruzzante (2012) Biocomplexity in a demersal exploited
fish, white hake (Urophycis tenuis): Depth related structure and inadequacy
of current management approaches. Can.
J. Fish. & Aquat. Sci. in press.
Pampoulie C, AK Danielsdottir,V Thorsteinsson, E
Hjörleifsson, G Marteinsdóttir, DE Ruzzante (2012) The
composition of adult overwintering and juvenile aggregations of Atlantic cod
(Gadus morhua L.) around Iceland
using neutral and functional markers: a statistical challenge. Can. J. Fish.
& Aquat. Sci. in press.
IN PRINT
2011
Zemlak TS, SJ Walde, E. Habit, DE Ruzzante (2011) Climate
induced changes to the ancestral population size of two Patagonian galaxiids:
the influence of glacial cycling. Mol
Ecol 20: 5280-5294.
Bekkevold D, LAW Clausen, S Mariani, C André, EMC Hatfield,
E Torstensen, N Ryman, GR Carvalho, DE Ruzzante. 2011. Distributions of Atlantic herring
populations in a mixed feeding area determined with genetic mixed-stock
analysis. MEPS, 442: 187-199.
Palstra FP,
DE Ruzzante. 2011. Contemporary meta-population
effective size: Factors influencing its empirical estimation in salmonid
fish. Heredity, 107, 444–455
Jakobsdóttir KB, H Pardoe, Á Magnússon, H Björnsson,
C Pampoulie, DE Ruzzante, G Marteinsdóttir. 2011. Historical changes in genotypic
frequencies at the Pantophysin locus
in Atlantic cod in Icelandic waters: Evidence of fisheries-induced selection?
Evolutionary Applications, 4: 562-573.
Ruzzante DE, J Rabassa. 2011.
Palaeogeography and Palaeoclimatology of Patagonia: Effects on biodiversity. Biological
Journal of the Linnean Society, 103(2): 221-229. (Link)
Ruzzante DE, SJ Walde, PJ Macchi, M
Alonso, JP Barriga. 2011. Phylogeography and phenotypic
diversification in the Patagonian fish Percichthys trucha: the roles
of Quaternary glacial cycles and natural selection. Biological Journal of
the Linnean Society, 103(2): 514-529. (Link)
Hare M, L Nunney, M Schwartz, DE
Ruzzante, M Burford, RS Waples, K Ruegg, FP Palstra. (2011). Understanding
and estimating effective population size for practical application in marine
species management. Conservation Biology, 25(3):
438-449. (Link)
André C, LC Larsson, L Laikre, D Bekkevold, J Brigham, GR Carvalho, TG
Dahlgren, WF Hutchinson, S Mariani, K Mudde, DE Ruzzante, N Ryman (2011) Detecting
population structure in a high gene-flow species, Atlantic herring (Clupea
harengus): direct simultaneous evaluation of neutral vs. putatively
selected loci. Heredity, 106: 270-280. (Link)
2010
Bradbury IR, S Hubert, B Higgins, S
Bowman, I Paterson, P Snelgrove, C Morris, R Gregory, D Hardie, JA Hutchings,
T Borza, DE Ruzzante, CT Taggart, P Bentzen (2010) Parallel adaptive
evolution of Atlantic cod on both sides of the Atlantic Ocean in response to
temperature. Proceedings of the Royal Society of London B, 277: 3725-3734.
Habit E, P Piedra, DE
Ruzzante, SJ Walde, VE Cussac, M Belk, J Gonzalez, N Colin. 2010.
Changes in the distribution of native fishes in response to introduced
species and other anthropogenic effects. Global Ecology and Biogeography,
19: 697–710.
Zemlak, TS,
E Habit, SJ Walde, C Carrea, DE Ruzzante. 2010. Surviving
historical Patagonian landscapes and climate: molecular insights from Galaxias
maculatus. BMC, Evolutionary Biology, 2010, 10: 67
(http://www.biomedcentral.com/1471-2148/10/67).
Paterson IG, D Hardie,
MA Treble, DE Ruzzante. 2010. Development of 13 polymorphic
microsatellite loci for the Greenland Halibut (Reinhardtius
hippoglossoides). Conservation Genetics Resources 2:
97-100.
D Roy,
IG Paterson, TR Hurlbut, DE Ruzzante. 2010. Development and design of
five multi-locus microsatellite PCR
panels for population genetic surveys of white hake (Urophycis tenuis)
in the Northwest Atlantic. Conservation Genetic Resources, 2:
45-49.
Palstra, FP,
DE Ruzzante. 2010. A temporal perspective on population structure and
gene flow in Atlantic salmon (Salmo salar) in Newfoundland. Can. J.
Fish. Aquat. Sci., 67(2): 225 - 242.
2009
Gomez-Uchida
D, T Knight, DE
Ruzzante. 2009. Interaction of landscape and
life-history attributes on genetic diversity, neutral divergence and gene flow in a pristine community of
salmonids. Molecular Ecology, 18: 4854-4869.
Gaggiotti O, D Bekkevold, H Jorgensen,
M Foll, G Carvalho, C Andre, DE Ruzzante. 2009. Disentangling
effects of evolutionary, demographic & environmental factors influencing
genetic structure of natural populations: Atlantic Herring as a case study. Evolution, 63 (11):
2939-2951.
Molecular
Ecology Resources Primer Development Consortium 2009. Permanent
Genetic Resources Note. Paterson
IG, MI Trucco, ML Lasta, DE
Ruzzante. Isolation and characterization of 11 microsatellite loci for the
Patagonian Scallop, Zygochlamys patagonica. Mol. Ecol. Res., 9: 1460-1466.
Carrea
C, IG Paterson, VE
Cussac, DE Ruzzante.
2009. Ten novel microsatellite loci characterized for a remarkably
widespread fish: Galaxias maculatus (Galaxiidae). Mol. Ecol. Res.
9: 1503-1505.
Palstra
FP, MW O’Connell, DE Ruzzante. 2009.
Age structure, demography and effective population size in Atlantic
salmon (Salmo salar). Genetics, 182(4):1233-1249.
2008
Zemlak TS, EM
Habit, SJ Walde, MA Battini, E Adams, DE Ruzzante. 2008. Across the southern Andes on
fin: Glacial refugia, drainage reversals & a secondary contact zone
revealed by the phylogeographic signal of Galaxias platei in
Patagonia. Mol. Ecol., 17: 5049-5061. [View.Pdf]
Gomez-Uchida
D, KP Dunphy,
MF O’Connell, DE Ruzzante.
2008. Genetic divergence between sympatric Arctic charr Salvelinus alpinus
(L.) morphs in Gander Lake, Newfoundland: roles of migration, mutation, and
unequal effective population sizes. J Fish Biol, 73: 2040-2057. [View.Pdf]
Palstra
FP, DE Ruzzante. 2008.
Genetic estimates of contemporary effective population size: what can
they tell us about the importance of genetic stochasticity for wild
populations persistance? Molecular Ecology, 17: 3428 – 3447 (Invited
Review). [View.Pdf]
Stet
RJM, K Mudde, JW Wynne, A Nooijen, TG Dahlgren, DE Ruzzante, C
Andre. 2008. Characterization of a major histocompatibility Class II A
gene (Clha – DAA) with an embedded microsatellite marker in Atlantic
herring, Clupea harengus. J Fish Biol, 73: 367
- 381. [View.Pdf]
Ruzzante DE, SJ Walde, JC Gosse, VE Cussac, E
Habit, TS Zemlak, EDM Adams.. 2008. Climate Control on
Ancestral Population Dynamics: Insight from Patagonian Fish Phylogeography. Molecular
Ecology 17: 2234 - 2244. [View.Pdf]
Paterson I, S Walde, V Cussac, E Habit, DE Ruzzante. 2008.
Isolation and characterization of 13 microsatellite loci for Percichthys
trucha (Percichthyidae). Mol Ecol Res 8: 907-909. [View.Pdf]
Jørgensen H, C
Pertoldi, MM Hansen, DE Ruzzante, V Loeschcke. 2008. Genetic & environmental
correlates of morphological variation in a marine fish: the case of Baltic
Sea herring. Can J Fish Aquat Sci, 65: 389-400. [View.Pdf]
2007
Palstra, F, MW O'Connell, DE Ruzzante. 2007 Population
structure and gene flow reversals in Atlantic salmon (Salmo salar) over
contemporary and long-term temporal scales: effects of population size and
life history. Molecular
Ecology, 16: 4504 -
4522 (doi: 10.1111/j.1365-294X2007.03541.x).
Buria L, SJ Walde, M Battini, PJ Macchi, M
Alonso, DE Ruzzante, VE Cussac. (2007) Movement of
an endemic perch (Percichthys
trucha) in a montane Patagonian lake during spawning and
pre-spawning periods. Journal Fish Biology , 70: 215 -230. [View.PDF]
2006
Pampoulie C, DE Ruzzante, V Chosson, TD Jörunsdóttir, L
Taylor, V Thorsteinsson, AK Daníelsdóttir & G Marteinsdóttir. 2006. The
genetic structure of Atlantic cod (Gadus morhua) around Iceland: insight
fmicrosatellites, the Pan I locus, and tagging experiments. Can.
J. Fish. Aquat. Sci ., 63: 2660 - 2674. [View.PDF]
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Ruzzante DE, SJ
Walde, VE Cussac, ML Dalebout, J Seibert, S Ortubay, E Habit (2006)
Phylogeography of the Percichthyidae in Patagonia: roles of orogeny,
glaciation, and volcanism. Molecular
Ecology,
15 (10): 2949 - 2968. [View.PDF]
Dalebout ML, DE Ruzzante, H Whitehead, N Oien (2006)
Genetic distinctiveness and population connectivity in North Atlantic
bottlenose whales (Hyperoodon
ampullatus). Molecular
Ecology, 15 (11):
3115 - 3129. doi: 10.1111/j.1365-294X.2006.03004.x [View.PDF]
Seibert, J. & DE Ruzzante
(2006) Isolation and characterization of eight microsatellite
loci for white hake (Urophycis
tenuis). Mol
Ecol Notes, 6: 924 - 926. doi: 10.1111/j.1471-8286.2006.01401.x
[View.PDF]
Ryman N, S Palm, C André C, GR Carvalho, TG Dahlgren PE Jorde, L Laikre, LC
Larsson, A Palme, DE Ruzzante.
2006. Power for detecting genetic divergence: difference between
statistical methods and marker loci. Molecular
Ecology, 15: 2031 - 2045. [View.PDF]
Ruzzante
DE, Mariani S, D Bekkevold, C André, H Mosegaard, LAW
Clausen, T Dahlgren, WF Hutchinson, EMC Hatfield, E Torstensen, J Brigham,
EJ Simmonds, L Laikre, LC Larsson, RJM Stet, N Ryman & GR Carvalho.
2006. Biocomplexity in a highly migratory pelagic marine fish, Atlantic
herring. Proc.
Roy. Soc. London B: 273:1459 - 1464. doi:
10.1098/rspb.2005.3463 [View.PDF]
2005
Bekkevold D, C Andre, T Dahlgren, H
Mosegaard, L Clausen, GR Carvalho, E Torstensen, E Nordinger, T Andersen,
& DE Ruzzante.
2005. Environmental correlates of population differentiation in Atlantic
herring (Clupea harengus). Evolution
59, 2656-2668. [View.PDF]
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Mariani S,
WF Hutchinson, EMC Hatfield, DE
Ruzzante, EJ Simonds, TG Dahlgren, C Andre, J Brigham, E
Torstensen, GR Carvalho. 2005. North Sea herring population structure:
isolation by distance and age-class effect.
MEPS 303: 245-257. [View.PDF]
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Jørgensen
HA, MM Hansen, D Bekkevold,
DE Ruzzante, V Loeschcke. 2005. Marine landscapes and population
genetic structure of herring (Clupea harengus) in the Baltic Sea. Molecular
Ecology 14, 3219-3234. [View.PDF]
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Milano D,
DE Ruzzante ,
VE Cussac, PJ Macchi, RA Ferriz, JP Barriga, JA Aigo, ME Lattuca, and SJ
Walde. 2005. Latitudinal and ecological correlates of morphological
variation in Galaxias platei (Pisces: Galaxiidae) in Patagonia. Biological
Journal of the Linnean Society, 87, 69-82. [View.PDF]
2004
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Ruzzante,
DE, MM Hansen,
D Meldrup, K Ebert. 2004. Stocking impact and migration pattern in an
anadromous brown trout (Salmo
trutta) complex: where have all the stocked spawning sea trout
gone? Molecular
Ecology, 13, 1433-1445 [View.PDF]
2003
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Nielsen, EE, MM Hansen,
DE Ruzzante , D Meldrup, P Grønkjær. 2003. A hybrid zone in
Atlantic cod (Gadus
morhua)
in the Baltic and the Danish Belt Sea revealed by individual admixture
analysis. Molecular
Ecology, 12, 1497-1508. [View Abstract]
[View PDF]
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Møller, P, EW Born, R Dietz, T
Haug, DE Ruzzante , N Øien.
2003. Differences in fatty acid composition of blubber in
minke whales (Balaenoptera
acutorostrata) from Greenland, the NE Atlantic Ocean,
and the North Sea, 1998.
Journal
of Cetacean Research and Management, Cambridge, England,
5(2): 115-124 [View.PDF]
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Ruzzante,
DE, SJ Walde,
VE Cussac, PJ Macchi, MF Alonso, M Battini. 2003. Resource polymorphism in
a Patagonian fish Percichthys
trucha
(Percichthyidae): phenotypic evidence for interlake pattern variation. Biological
Journal of the Linnean Society, 78, 497-515. [View Abstract] [View
PDF]
2002
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Hansen, MM, DE
Ruzzante , EE Nielsen, D Bekkevold, K-LD
Mensberg. 2002. Long term effective population sizes,
temporal stability of genetic composition and potential for local adaptation
in anadromous brown trout (Salmo
truttta) populations. Molecular
Ecology, 11, 2523-2535. [View Abstract]
[View
PDF]
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Milano,
D, VE Cussac, PJ Macchi, DE Ruzzante, PH Vigliano, MF
Alonso, MA Denegri. 2002. Predator associated morphology in Galaxias platei (Pisces: Galaxiidae) in
Patagonian lakes.
J.
Fish Biol. 61: 138-156. [View Abstract]
[View
PDF]
2001
& Earlier
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Andersen,
LW, DE Ruzzante, M Walton, P Berggren, A Bjørge, C Lockyer.
2001. Conservation
genetics of harbour porpoise, Phocoena phocoena, in the NE Atlantic. Conservation
Genetics 2(4): 309-324. [View Abstract]
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Ruzzante,
DE, CT Taggart,
RW Doyle, D Cook. 2001. Stability in the historical pattern of genetic
structure of Newfoundland cod (Gadus morhua) despite the catastrophic decline in population
size from 1964 to 1994.
Conservation
Genetics 2(3): 257-269. [View Abstract]
[View
PDF]
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Ruzzante,
DE, MM Hansen, D
Meldrup. 2001. Distribution of individual inbreeding
coefficients, relatedness and influence of stocking on native anadromous
brown trout (Salmo
trutta) population structure. Molecular
Ecology 10 (9): 2107-2128. [View Abstract]
[View
PDF]
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Hansen,
MM, DE Ruzzante, EE Nielsen, and K-LD Mensberg. 2001. Microsatellite
polymorphism in domesticated and wild brown trout (Salmo trutta)
and stocking impact assessment.
Ecological
Applications, 11(1): 148-160. [View Abstract]
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Hansen,
MM, EE Nielsen, DE Ruzzante, C Bouza, K-LD Mensberg. 2000. Genetic
monitoring of supportive breeding in brown trout (Salmo trutta
L.), using microsatellite DNA markers. Can.
J. Fish. Aquat. Sci., 57: 2130-2139. [View Abstract]
[View
PDF]
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Ruzzante,
DE, CT Taggart, D
Cook, S Lang. 2000. Mixed-stock analysis of Atlantic
cod near the Gulf of St. Lawrence based on microsatellite DNA. Ecological
Applications, 10(4): 1090-1109. [View Abstract]
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Hansen,
MM, DE Ruzzante, EE Nielsen, and K.-LD Mensberg. 2000. Microsatellite
and mitochondrial DNA polymorphism reveals life-history dependent
interbreeding between hatchery and wild brown trout (Salmo trutta). Molecular
Ecology, 9(4): 583-594. [View Abstract]
[View
PDF]
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Logan,
MS, SJ Iverson, DE Ruzzante, SJ Walde, P Macchi, M Alonso,
VE Cussac. 2000. Long term diet differences between morphs
in trophically polymorphic Percichthys
trucha (Pisces: Percichthyidae) populations
from the southern Andes.
Biological
Journal of the Linnean Society, 69: 599-616. [View Abstract]
[View
PDF]
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Ruzzante,
DE, JS
Wroblewskic, CT Taggart, RK Smedbol, D Cook and SV Goddard. 2000. Bay-scale
population structure in coastal Atlantic cod in Labrador and Newfoundland,
Canada. J.
Fish Biol., 56: 431-447. [View Abstract]
[View
PDF]
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Ruzzante,
DE, CT Taggart, D
Cook. 1999. A review of the evidence for genetic
structure of cod (Gadus
morhua) populations in the Northwest Atlantic
and population affinities of larval cod off Newfoundland and the Gulf of
St. Lawrence. Fisheries
Research, 43: 79-97. [View Abstract]
[View
PDF]
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Ruzzante,
DE, SJ Walde, VE Cussac,
P Macchi, M Alonso. 1998. Trophic
polymorphism, habitat and diet segregation within Percichthys trucha
(Percichthyidae, Pisces) in the Andes. Biological
Journal of the Linnean Society, 65: 191-214. [View Abstract]
[View
PDF]
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Ruzzante,
DE, CT Taggart, D
Cook. 1998. A nuclear DNA basis for shelf- and
bank-scale population structure in NW Atlantic cod (Gadus morhua):
Labrador to Georges Bank.
Molecular
Ecology, 7: 1663-1680. [Cover issue] [View Abstract]
[View
PDF]
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Ruzzante,
DE. 1998. A
comparison of several measures of genetic distance and population structure
with microsatellite data: bias and sampling variance. Can.
J. Fish. Aquat. Sci., 55: 1-14. [View Abstract]
[View
PDF]
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Ruzzante
DE, CT Taggart, D
Cook, and SV Goddard. 1997. Genetic
differentiation between inshore and offshore Atlantic cod (Gadus morhua)
off Newfoundland: a test, and evidence of temporal stability. Can.
J. Fish. Aquat. Sci., 54: 2700-2708. [View Abstract]
[View
PDF]
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McConnell
SKJ, DE Ruzzante, P O'Reilly, L Hamilton, JM Wright. 1997. Microsatellite
loci reveal highly significant genetic differences between Atlantic salmon
(Salmo
salar) populations from the East Coast of
Canada. Molecular
Ecology, 6: 1075-1089. [View Abstract]
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Ruzante
DE, CT Taggart, D
Cook. 1996. Spatial and temporal variation in the
genetic composition of a larval cod (Gadus morhua)
aggregation: cohort contribution and genetic stability. Can.
J. Fish. Aquat. Sci.., 53: 2695-2705. [View Abstract]
[View.PDF]
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Bentzen
P, CT Taggart, DE Ruzzante, D Cook. 1996. Microsatellite
polymorphism and the population structure of cod (Gadus morhua)
in the North West Atlantic.
Can.
J. Fish. Aquat. Sci., 53: 2706-2721. [View Abstract]
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Ruzzante
DE, CT Taggart, D
Cook, SV Goddard. 1996. Genetic differentiation between
inshore and offshore Atlantic cod (Gadus morhua)
off Newfoundland: microsatellite DNA variation and antifreeze protein
levels. Can.
J. Fish. Aquat. Sci., 53: 634-645. [View Abstract] [View
PDF]
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Ruzzante
DE, DC Hamilton,
DL Kramer, JWA Grant. 1996. Scaling of the
variance and the quantification of resource monopolization. Behavioural Ecology,
7: 199-207. [View Abstract]
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